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Bioinformatics Associate

Company: N/A

Location: South San Francisco, CA

Pay: N/A

Contact Information


Name: Clara Cresswell
Phone: n/a
Fax: n/a
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Job Description

Bioinformatics Associate
Duties: The candidate will perform data management and curation tasks to support biomarker discovery and companion diagnostic development efforts in the Oncology Biomarker Development department.  In the process of performing this work, the candidate will communicate extensively with scientists, research associates, operations managers, clinical data managers, analysts and vendor representatives.
 
Duties could include:
 
Working with biosample operations managers and biometrics colleagues to draft data transfer specifications and statements of work.
Acquiring and QC'ing biomarker data files from internal groups and external vendors.  Capturing data in internal file systems and databases.
Monitoring data processing requests and submitting data files to analysis pipelines Merging different data biomarker types with clinical data to generate analysis-ready data sets Curating and cataloguing biomarker data sets, maintaining listings of available data,  and distributing to collaborators Maintaining and curating content of internal knowledge sharing repositories
 
Skills: Required
 
Familiarity working in a Linux computing environment Proficiency in a scripting language such as Perl or Python Experience managing and curating biological or clinical data Careful, detail-oriented working style Outstanding communication, collaboration, and problem solving skills
 
 
Experience with the following is desired:
 
Relational databases and SQL
Statistical software packages such as R or SAS Clinical trial data management Working with genomics datasets Setting up and maintaining online content management systems or wikis
 
 
Keywords:
Education: Master's degree in bioinformatics, biostatistics, statistics; or bachelor's degree in a life science or statistical field with at least three years of experience working in a quantitative biosciences position Skills and Experience:
Required Skills:
BIOINFORMATICS
BIOMETRICS
BIOSCIENCES
OPERATIONS
QUANTITATIVE
Additional Skills:
BIOSTATISTICS
CLINICAL TRIAL
CONTENT MANAGEMENT
CONTENT MANAGEMENT SYSTEMS
DATA MANAGEMENT
DATABASES
DATASETS
DETAIL-ORIENTED
FILE SYSTEMS
GENOMICS
LIFE SCIENCE
LINUX
ONCOLOGY
OUTSTANDING COMMUNICATION
PERL
PROBLEM SOLVING
PYTHON
SAS
SCRIPTING
SERIAL ATTACHED SCSI
SQL
STATISTICS








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